3D Visualization

High quality three dimensional visualization is essential for analyzing and understanding brain circuits. I have written a software package for building models of an individual’s cortical surface and white matter tracts to help visualize the functional and structural properties of brain circuits in 3D. This code is included in the AFQ software package and can be downloaded from my github site.

Cortical Surface and Fiber Tracts

FibersMovie_3Dvis

Diffusion Simulation